bgeot_node_tab.cc

/*===========================================================================

 Copyright (C) 2007-2017 Yves Renard

 This file is a part of GetFEM++

 GetFEM++  is  free software;  you  can  redistribute  it  and/or modify it
 under  the  terms  of the  GNU  Lesser General Public License as published
 by  the  Free Software Foundation;  either version 3 of the License,  or
 (at your option) any later version along with the GCC Runtime Library
 Exception either version 3.1 or (at your option) any later version.
 This program  is  distributed  in  the  hope  that it will be useful,  but
 WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
 or  FITNESS  FOR  A PARTICULAR PURPOSE.  See the GNU Lesser General Public
 License and GCC Runtime Library Exception for more details.
 You  should  have received a copy of the GNU Lesser General Public License
 along  with  this program;  if not, write to the Free Software Foundation,
 Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301, USA.

===========================================================================*/


#include "getfem/bgeot_node_tab.h"

namespace bgeot {

  bool node_tab::component_comp::operator()(size_type i1,size_type i2) const {
    if (i1 == i2) return false;
    const base_node &pt1((i1 == size_type(-1)) ? *c : (*vbn)[i1]);
    const base_node &pt2((i2 == size_type(-1)) ? *c : (*vbn)[i2]);
    unsigned d = pt1.size();
    base_small_vector::const_iterator it = v.begin();
    base_node::const_iterator it1 = pt1.begin(), it2 = pt2.begin();
    scalar_type a(0);
    for (size_type i = 0; i < d; ++i) a += (*it++) * (*it1++ - *it2++);
    if (a != scalar_type(0)) return a < 0;
    if (i1 == size_type(-1) || i2 == size_type(-1)) return false;
    return i1 < i2;
  }

  node_tab::component_comp::component_comp
  (const dal::dynamic_tas<base_node> &vbn_, const base_node &c_, unsigned dim)
    : vbn(&vbn_), c(&c_), v(dim) {
    do gmm::fill_random(v); while (gmm::vect_norm2(v) == 0);
    gmm::scale(v, scalar_type(1) / gmm::vect_norm2(v) );
  }

  void node_tab::add_sorter(void) const {
    if (sorters.size() > 1)
      GMM_WARNING3("Multiple sort needed for node tab : " << sorters.size()+1);
    sorters.push_back(sorter(component_comp(*this, c, dim_)));
    for (dal::bv_visitor i(index()); !i.finished(); ++i)
      sorters.back().insert(size_type(i));
  }

  size_type node_tab::search_node(const base_node &pt,
                                  const scalar_type radius) const {
    if (card() == 0) return size_type(-1);

    scalar_type eps_radius = std::max(eps, radius);
    for (size_type is = 0; is < 5; ++is) {
      if (is >= sorters.size()) add_sorter();

      c = pt - eps_radius * sorters[is].key_comp().v;

      sorter::const_iterator it = sorters[is].lower_bound(size_type(-1));
      scalar_type up_bound
        = gmm::vect_sp(pt, sorters[is].key_comp().v) + 2*eps_radius;
      size_type count = 0;
      // if (is > 0) cout << "begin loop " << " v = " <<  sorters[is].key_comp().v << "sp c = " << gmm::vect_sp(c, sorters[is].key_comp().v) << " eps_radius = " << eps_radius << " max_radius " <<  max_radius << endl;
      for (; it != sorters[is].end() && count < 20; ++it, ++count) {

        const base_node &pt2 = (*this)[*it];

//         if (count > 0) {
//           cout << "count " << count << " is = " << is << " pt = " << pt << " pt2 = " << pt2 << " sp = " << gmm::vect_sp(pt2, sorters[is].key_comp().v) << " spinit = " << gmm::vect_sp(pt, sorters[is].key_comp().v) << endl;
//         }

        if (gmm::vect_dist2(pt, pt2) < eps_radius) return *it;
        if (gmm::vect_sp(pt2, sorters[is].key_comp().v) > up_bound)
          return size_type(-1);
      }
      if (it == sorters[is].end()) return size_type(-1);
    }
    GMM_ASSERT1(false, "Problem in node structure !!");
  }

  void node_tab::clear(void) {
    dal::dynamic_tas<base_node>::clear();
    sorters = std::vector<sorter>();
    max_radius = scalar_type(1e-60);
    eps = max_radius * prec_factor;
  }

  size_type node_tab::add_node(const base_node &pt,
                               const scalar_type radius,
                               bool remove_duplicated_nodes) {
    scalar_type npt = gmm::vect_norm2(pt);
    max_radius = std::max(max_radius, npt);
    eps = max_radius * prec_factor;

    size_type id;
    if (this->card() == 0) {
      dim_ = pt.size();
      id = dal::dynamic_tas<base_node>::add(pt);
      for (size_type i = 0; i < sorters.size(); ++i) sorters[i].insert(id);
    }
    else {
      GMM_ASSERT1(dim_ == pt.size(), "Nodes should have the same dimension");
      id = remove_duplicated_nodes ? search_node(pt, radius) : size_type(-1);
      if (id == size_type(-1)) {
        id = dal::dynamic_tas<base_node>::add(pt);
        for (size_type i = 0; i < sorters.size(); ++i) {
          sorters[i].insert(id);
          GMM_ASSERT3(sorters[i].size() == card(), "internal error");
        }
      }
    }
    return id;
  }

  void node_tab::swap_points(size_type i, size_type j) {
    if (i != j) {
      bool existi = index().is_in(i), existj = index().is_in(j);
      for (size_type is = 0; is < sorters.size(); ++is) {
        if (existi) sorters[is].erase(i);
        if (existj) sorters[is].erase(j);
      }
      dal::dynamic_tas<base_node>::swap(i, j);
      for (size_type is = 0; is < sorters.size(); ++is) {
        if (existi) sorters[is].insert(j);
        if (existj) sorters[is].insert(i);
        GMM_ASSERT3(sorters[is].size() == card(), "internal error");
      }
    }
  }

  void node_tab::sup_node(size_type i) {
    if (index().is_in(i)) {
      for (size_type is = 0; is < sorters.size(); ++is) {
        sorters[is].erase(i);
        GMM_ASSERT3(sorters[is].size()+1 == card(), "Internal error");
        // if (sorters[is].size()+1 != card()) { resort(); }
      }
      dal::dynamic_tas<base_node>::sup(i);

    }
  }

  void node_tab::translation(const base_small_vector &V) {
    for (dal::bv_visitor i(index()); !i.finished(); ++i) (*this)[i] += V;
    resort();
  }

  void node_tab::transformation(const base_matrix &M) {
    base_small_vector w(M.nrows());
    GMM_ASSERT1(gmm::mat_nrows(M) != 0 && gmm::mat_ncols(M) == dim(),
                "invalid dimensions for the transformation matrix");
    dim_ = unsigned(gmm::mat_nrows(M));
    for (dal::bv_visitor i(index()); !i.finished(); ++i) {
      w = (*this)[i];
      gmm::resize((*this)[i], dim_);
      gmm::mult(M,w,(*this)[i]);
    }
    resort();
  }

  node_tab::node_tab(scalar_type prec_loose) {
    max_radius = scalar_type(1e-60);
    sorters.reserve(5);
    prec_factor = gmm::default_tol(scalar_type()) * prec_loose;
    eps = max_radius * prec_factor;
  }

  node_tab::node_tab(const node_tab &t)
    : dal::dynamic_tas<base_node>(t), sorters(), eps(t.eps),
      prec_factor(t.prec_factor), max_radius(t.max_radius), dim_(t.dim_)  {}

  node_tab &node_tab::operator =(const node_tab &t) {
    dal::dynamic_tas<base_node>::operator =(t);
    sorters = std::vector<sorter>();
    eps = t.eps; prec_factor = t.prec_factor;
    max_radius = t.max_radius; dim_ = t.dim_;
    return *this;
  }

}